Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | HRUBRI_RS04205 | Q9A9Z0 | Positive | 961247 - 962032 | 28412.9 |
| is1182 family transposase | HRUBRI_RS04210 | Not Available | Positive | 962170 - 963636 | 56213.3 |
| lysr family transcriptional regulator | HRUBRI_RS04215 | P52661 | Negative | 963995 - 964936 | 34712.7 |
| porin | HRUBRI_RS04220 | Not Available | Positive | 965258 - 966379 | 39435.2 |
| smp-30/gluconolactonase/lre family protein | HRUBRI_RS04225 | Q1JUP5 | Positive | 966542 - 967423 | 31806.6 |
| iclr family transcriptional regulator | HRUBRI_RS04230 | Not Available | Negative | 967507 - 968358 | 31700.2 |
| l-fuconate dehydratase | HRUBRI_RS04235 | Q0QWS4 | Positive | 968730 - 970007 | 47638.4 |
| sdr family oxidoreductase | HRUBRI_RS04240 | Q9X248 | Positive | 970051 - 970827 | 27882.2 |
| l-rhamnose mutarotase | HRUBRI_RS04245 | Q8P3K1 | Positive | 970835 - 971179 | 13300.0 |
| sugar abc transporter atp-binding protein | HRUBRI_RS04250 | A0B297 | Positive | 971400 - 972947 | 56439.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



