Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | HRUBRI_RS04110 | A6QR56 | Negative | 937372 - 939747 | 84791.1 |
| deoxyribose-phosphate aldolase | HRUBRI_RS04115 | Q91YP3 | Negative | 939770 - 940801 | 37200.1 |
| deor/glpr family dna-binding transcription regulator | HRUBRI_RS04120 | P0ACK7 | Positive | 941076 - 941894 | 29229.0 |
| type i methionyl aminopeptidase | HRUBRI_RS04125 | P0AE20 | Negative | 941923 - 942720 | 28835.6 |
| eama family transporter | HRUBRI_RS04130 | P42194 | Negative | 942815 - 943714 | 31727.8 |
| marr family winged helix-turn-helix transcriptional regulator | HRUBRI_RS04135 | P42195 | Positive | 943778 - 944323 | 20162.5 |
| mfs transporter | HRUBRI_RS04140 | Not Available | Negative | 944418 - 945590 | 40489.4 |
| galactonate dehydratase | HRUBRI_RS04145 | B2UCA8 | Negative | 945803 - 946951 | 42385.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | HRUBRI_RS04150 | Q92RN8 | Negative | 947066 - 947704 | 22048.8 |
| 2-dehydro-3-deoxygalactonokinase | HRUBRI_RS04155 | P31459 | Negative | 947738 - 948700 | 34375.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



