Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein ybib | HRUBRI_RS03630 | P30177 | Positive | 814733 - 815728 | 36026.5 |
| hypothetical protein | HRUBRI_RS03635 | Not Available | Negative | 815992 - 816447 | 17637.4 |
| bifunctional diguanylate cyclase/phosphodiesterase | HRUBRI_RS03640 | Not Available | Positive | 817442 - 819544 | 75913.3 |
| mate family efflux transporter | HRUBRI_RS03645 | Q5NYX9 | Negative | 819534 - 820925 | 48829.0 |
| glycosyltransferase family 39 protein | HRUBRI_RS03650 | Not Available | Negative | 820965 - 822689 | 63780.9 |
| type b 50s ribosomal protein l31 | HRUBRI_RS03655 | A6SVL3 | Negative | 822933 - 823202 | 10127.0 |
| transcription termination factor rho | HRUBRI_RS03660 | Q7NXP1 | Negative | 823467 - 824729 | 47262.5 |
| thioredoxin trxa | HRUBRI_RS03665 | Q9X2T1 | Negative | 824860 - 825186 | 11651.1 |
| pd-(d/e)xk nuclease family protein | HRUBRI_RS03670 | Not Available | Positive | 825673 - 828432 | 101982.0 |
| exodeoxyribonuclease v subunit beta | HRUBRI_RS03675 | Q03W49 | Positive | 828429 - 831902 | 127696.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



