Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | HRUBRI_RS03535 | A6SV54 | Negative | 790680 - 791636 | 35071.0 |
| dna mismatch repair endonuclease mutl | HRUBRI_RS03540 | A4G289 | Negative | 791648 - 793585 | 69866.5 |
| methyl-accepting chemotaxis protein | HRUBRI_RS03545 | Not Available | Negative | 793724 - 795697 | 69655.8 |
| hypothetical protein | HRUBRI_RS24705 | Not Available | Negative | 795690 - 795929 | 8301.96 |
| eal domain-containing protein | HRUBRI_RS03550 | P76129 | Negative | 796151 - 799156 | 111724.0 |
| vtt domain-containing protein | HRUBRI_RS03555 | Not Available | Positive | 799651 - 800313 | 24470.8 |
| n-acetylmuramoyl-l-alanine amidase | HRUBRI_RS03560 | P63884 | Negative | 800391 - 801752 | 49714.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | HRUBRI_RS03565 | P0AF68 | Negative | 801716 - 802201 | 17664.2 |
| trna epoxyqueuosine(34) reductase queg | HRUBRI_RS03570 | Q63WN0 | Positive | 802247 - 803377 | 41377.5 |
| aec family transporter | HRUBRI_RS03575 | Not Available | Negative | 803394 - 804284 | 31333.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



