Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | HRUBRI_RS03485 | A6SV24 | Negative | 779372 - 780712 | 49839.9 |
| lysr family transcriptional regulator | HRUBRI_RS03490 | Not Available | Negative | 780909 - 781808 | 32660.4 |
| cysteine hydrolase family protein | HRUBRI_RS03495 | G2X4M1 | Positive | 781910 - 782518 | 20683.8 |
| nucleoside/nucleotide kinase family protein | HRUBRI_RS03500 | Q9UTC5 | Positive | 782916 - 783533 | 22556.1 |
| abc transporter substrate-binding protein | HRUBRI_RS03505 | A0QYB5 | Positive | 783647 - 784597 | 32511.2 |
| sugar abc transporter atp-binding protein | HRUBRI_RS03510 | Q3MB44 | Positive | 784711 - 786300 | 56788.9 |
| abc transporter permease subunit | HRUBRI_RS03515 | Not Available | Positive | 786321 - 787331 | 35196.8 |
| age family epimerase/isomerase | HRUBRI_RS03520 | F2JVT6 | Positive | 787358 - 788548 | 45418.0 |
| ggdef domain-containing protein | HRUBRI_RS03525 | Not Available | Negative | 788619 - 789980 | 50184.9 |
| Trna-met | Not Available | Not Available | Positive | 790510 - 790586 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



