Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside phosphotransferase family protein | HRUBRI_RS03385 | Q9K188 | Negative | 754143 - 755174 | 38812.6 |
| lps-assembly protein lptd | HRUBRI_RS03390 | Q8Y221 | Positive | 755272 - 757554 | 84091.2 |
| peptidylprolyl isomerase | HRUBRI_RS03395 | Q3SGF9 | Positive | 757580 - 759082 | 55245.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | HRUBRI_RS03400 | A6SV12 | Positive | 759458 - 760480 | 35765.3 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | HRUBRI_RS03405 | A6SV13 | Positive | 760510 - 761292 | 29124.8 |
| hypothetical protein | HRUBRI_RS03410 | Not Available | Positive | 761439 - 761813 | 13678.3 |
| eal domain-containing protein | HRUBRI_RS03415 | P55552 | Positive | 762084 - 763679 | 59399.9 |
| lactoylglutathione lyase | HRUBRI_RS03420 | P0A0T2 | Positive | 763780 - 764184 | 15079.9 |
| sterol desaturase family protein | HRUBRI_RS03425 | Q6NYE4 | Positive | 764426 - 765544 | 42168.5 |
| chloride channel protein | HRUBRI_RS03430 | A5F0D5 | Positive | 765633 - 766916 | 45026.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



