Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | HRUBRI_RS03335 | A4G213 | Negative | 744772 - 745878 | 40531.8 |
| nudix hydrolase | HRUBRI_RS03340 | A7ZKS4 | Negative | 745938 - 746426 | 17432.0 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | HRUBRI_RS03345 | Q2RSB2 | Positive | 746593 - 747708 | 38976.6 |
| aspartate 1-decarboxylase | HRUBRI_RS03350 | Q9ZHI5 | Positive | 747788 - 748150 | 13398.1 |
| nad(p) transhydrogenase subunit alpha | HRUBRI_RS03355 | Q2RSB3 | Positive | 748212 - 748526 | 11010.9 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | HRUBRI_RS03360 | Q2RSB4 | Positive | 748523 - 749962 | 49948.0 |
| uracil phosphoribosyltransferase | HRUBRI_RS03365 | Q2SZS9 | Negative | 750045 - 750692 | 23788.1 |
| fad-dependent monooxygenase | HRUBRI_RS03370 | P25534 | Negative | 750816 - 751964 | 41446.1 |
| xaa-pro aminopeptidase | HRUBRI_RS03375 | P15034 | Negative | 752073 - 753419 | 49516.9 |
| n-acetylmuramate alpha-1-phosphate uridylyltransferase muru | HRUBRI_RS03380 | Q9JXY0 | Negative | 753416 - 754132 | 26390.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



