Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | HRUBRI_RS03035 | Q9ZCT3 | Negative | 682876 - 683958 | 38958.6 |
| phosphoribosylformylglycinamidine cyclo-ligase | HRUBRI_RS03040 | A0K4T7 | Positive | 684063 - 685106 | 36747.4 |
| is1182 family transposase | HRUBRI_RS03045 | Not Available | Positive | 685220 - 686686 | 56213.3 |
| proteasome-type protease | HRUBRI_RS03050 | Not Available | Negative | 686861 - 687739 | 32401.6 |
| alpha-e domain-containing protein | HRUBRI_RS03055 | Not Available | Negative | 687912 - 688904 | 37827.9 |
| circularly permuted type 2 atp-grasp protein | HRUBRI_RS03060 | Q55587 | Negative | 688907 - 690334 | 53209.2 |
| cupin domain-containing protein | HRUBRI_RS03065 | Not Available | Negative | 690593 - 691036 | 16217.3 |
| glutathione s-transferase family protein | HRUBRI_RS03070 | Not Available | Negative | 691121 - 691777 | 24525.9 |
| polyhydroxyalkanoate depolymerase | HRUBRI_RS03075 | Not Available | Positive | 692062 - 693288 | 45888.5 |
| duf2126 domain-containing protein | HRUBRI_RS03080 | Not Available | Positive | 693496 - 696879 | 126935.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



