Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | HRUBRI_RS02385 | Q45374 | Positive | 541484 - 542758 | 47416.0 |
| sdr family oxidoreductase | HRUBRI_RS02390 | Q56623 | Negative | 542755 - 543717 | 34146.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 544433 - 545965 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 546084 - 546160 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 546168 - 546243 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 546532 - 549403 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 549540 - 549652 | Not Available |
| adec/adek/oprm family multidrug efflux complex outer membrane factor | HRUBRI_RS02420 | Not Available | Negative | 550108 - 551559 | 52112.8 |
| efflux rnd transporter permease subunit | HRUBRI_RS02425 | P31224 | Negative | 551562 - 554708 | 111898.0 |
| efflux rnd transporter periplasmic adaptor subunit | HRUBRI_RS02430 | Not Available | Negative | 554720 - 555928 | 42176.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



