Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| j domain-containing protein | HRUBRI_RS02135 | Not Available | Negative | 483417 - 484511 | 42339.5 |
| carbohydrate kinase | HRUBRI_RS02140 | Not Available | Negative | 484529 - 485434 | 32570.9 |
| sugar-binding transcriptional regulator | HRUBRI_RS02145 | B1XEA0 | Negative | 485512 - 486474 | 34116.7 |
| sugar abc transporter substrate-binding protein | HRUBRI_RS02150 | Q9I1E0 | Positive | 486802 - 488157 | 49176.9 |
| carbohydrate abc transporter permease | HRUBRI_RS02155 | Q6CZ32 | Positive | 488274 - 489263 | 36279.5 |
| gmc oxidoreductase | HRUBRI_RS02160 | Q53683 | Positive | 489296 - 490075 | 28444.5 |
| had family phosphatase | HRUBRI_RS02165 | Not Available | Positive | 490075 - 490797 | 25557.8 |
| abc transporter atp-binding protein | HRUBRI_RS02170 | Q9KL04 | Positive | 490851 - 491969 | 40162.5 |
| d-arabinitol 4-dehydrogenase | HRUBRI_RS02175 | P58709 | Positive | 492008 - 493441 | 52736.5 |
| xylulokinase | HRUBRI_RS02180 | P09099 | Positive | 493512 - 494984 | 52553.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



