Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-aminoacyl-trna deacylase | HRUBRI_RS01950 | A4G1U1 | Positive | 439942 - 440433 | 17494.2 |
| ybhb/ybcl family raf kinase inhibitor-like protein | HRUBRI_RS01955 | Not Available | Positive | 440520 - 441167 | 23297.4 |
| histidine phosphatase family protein | HRUBRI_RS01960 | Q9SCS3 | Positive | 441177 - 441821 | 24293.5 |
| helix-turn-helix domain-containing protein | HRUBRI_RS01965 | Not Available | Positive | 441962 - 442231 | 9982.07 |
| type ii toxin-antitoxin system hipa family toxin | HRUBRI_RS01970 | Not Available | Positive | 442225 - 443592 | 50161.6 |
| trna dihydrouridine synthase dusb | HRUBRI_RS01975 | Q9HUW1 | Positive | 443756 - 444784 | 37775.3 |
| fis family transcriptional regulator | HRUBRI_RS01980 | Q8Y231 | Positive | 444952 - 445185 | 8765.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | HRUBRI_RS01985 | A6SUQ1 | Positive | 445267 - 446838 | 56110.1 |
| duf1493 family protein | HRUBRI_RS01990 | Not Available | Negative | 447049 - 447408 | 13893.3 |
| stm2901 family protein | HRUBRI_RS01995 | Not Available | Negative | 447408 - 447839 | 15902.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



