Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphocholine-specific phospholipase c | HRUBRI_RS19225 | P15713 | Negative | 4454599 - 4456728 | 78096.9 |
| glycolate oxidase subunit glcf | HRUBRI_RS19230 | P52074 | Negative | 4456902 - 4458143 | 45877.5 |
| glycolate oxidase subunit glce | HRUBRI_RS19235 | P52073 | Negative | 4458170 - 4459258 | 38837.6 |
| fad-linked oxidase c-terminal domain-containing protein | HRUBRI_RS19240 | P0AEQ0 | Negative | 4459261 - 4460748 | 53247.4 |
| lysr substrate-binding domain-containing protein | HRUBRI_RS19245 | P46068 | Negative | 4460996 - 4461886 | 33744.7 |
| fad-binding oxidoreductase | HRUBRI_RS19250 | F1QXM5 | Negative | 4461990 - 4463405 | 50912.9 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | HRUBRI_RS19255 | Q1LJ80 | Positive | 4463688 - 4464242 | 20030.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HRUBRI_RS19260 | Q2T7N5 | Negative | 4464374 - 4466239 | 66533.2 |
| polyprenyl synthetase family protein | HRUBRI_RS19265 | Q45220 | Negative | 4466327 - 4467274 | 33303.1 |
| exodeoxyribonuclease vii small subunit | HRUBRI_RS19270 | A4G1W7 | Negative | 4467274 - 4467543 | 9301.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



