Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | HRUBRI_RS18875 | B2SB45 | Negative | 4376872 - 4377282 | 15010.4 |
| response regulator | HRUBRI_RS18880 | Q50136 | Negative | 4377465 - 4377860 | 14410.7 |
| atpase domain-containing protein | HRUBRI_RS18885 | Not Available | Negative | 4377863 - 4379362 | 54152.6 |
| mfs transporter | HRUBRI_RS18890 | A4QH18 | Negative | 4379600 - 4380997 | 50656.4 |
| porin | HRUBRI_RS18895 | Not Available | Negative | 4381070 - 4382212 | 40997.0 |
| sugar phosphate isomerase/epimerase | HRUBRI_RS18900 | Q88JU3 | Negative | 4382503 - 4383375 | 32321.0 |
| shikimate dehydrogenase | HRUBRI_RS18905 | Not Available | Negative | 4383372 - 4384217 | 30495.2 |
| 4-hydroxyphenylpyruvate dioxygenase | HRUBRI_RS18910 | Q9I576 | Negative | 4384222 - 4385103 | 32830.1 |
| iclr family transcriptional regulator c-terminal domain-containing protein | HRUBRI_RS18915 | Q43992 | Positive | 4385233 - 4386015 | 28691.9 |
| iclr family transcriptional regulator c-terminal domain-containing protein | HRUBRI_RS18920 | O83046 | Positive | 4386032 - 4386862 | 29972.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



