Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydrogenase/arogenate dehydrogenase family protein | HRUBRI_RS25410 | P20692 | Negative | 4308540 - 4309427 | 30947.2 |
| prephenate dehydratase | HRUBRI_RS18590 | Q9ZHY3 | Negative | 4309467 - 4310540 | 39035.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | HRUBRI_RS18595 | A4G865 | Negative | 4310671 - 4311783 | 40406.2 |
| dna gyrase subunit a | HRUBRI_RS18600 | P41513 | Negative | 4311842 - 4314487 | 97588.9 |
| hypothetical protein | HRUBRI_RS24980 | Not Available | Negative | 4314841 - 4315128 | 10593.2 |
| outer membrane protein ompa | HRUBRI_RS18605 | Q05146 | Positive | 4315246 - 4315860 | 21397.5 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | HRUBRI_RS18610 | Q8Y0Z5 | Positive | 4316008 - 4316724 | 26193.6 |
| had family hydrolase | HRUBRI_RS18615 | Q4UVL3 | Positive | 4316813 - 4317469 | 23432.0 |
| duf748 domain-containing protein | HRUBRI_RS18620 | Not Available | Positive | 4317693 - 4321094 | 122670.0 |
| Tmrna,resume consensus sequence (at 85): cttaaatgcaaacgacga | Not Available | Not Available | Positive | 4321269 - 4321649 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



