Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | HRUBRI_RS18535 | P0AAP2 | Negative | 4298112 - 4299083 | 35893.9 |
| helix-hairpin-helix domain-containing protein | HRUBRI_RS18540 | Not Available | Negative | 4299373 - 4299783 | 14258.9 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | HRUBRI_RS18545 | Q7WGU8 | Negative | 4299911 - 4300846 | 33705.6 |
| udp-glucose/gdp-mannose dehydrogenase family protein | HRUBRI_RS18550 | O86422 | Negative | 4300884 - 4302263 | 50086.8 |
| lipopolysaccharide assembly protein lapb | HRUBRI_RS18555 | P0AB60 | Negative | 4302300 - 4303475 | 44173.1 |
| lipopolysaccharide assembly lapa domain-containing protein | HRUBRI_RS18560 | Not Available | Negative | 4303492 - 4303818 | 12307.4 |
| integration host factor subunit beta | HRUBRI_RS18565 | A4G858 | Negative | 4304150 - 4304455 | 11385.9 |
| 30s ribosomal protein s1 | HRUBRI_RS18570 | Q9JZ44 | Negative | 4304469 - 4306184 | 62290.3 |
| (d)cmp kinase | HRUBRI_RS18575 | Q1LQG9 | Negative | 4306401 - 4307069 | 24254.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HRUBRI_RS25405 | A4G861 | Negative | 4307127 - 4308458 | 48129.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



