Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | HRUBRI_RS18435 | P25539 | Positive | 4272109 - 4273230 | 39983.2 |
| riboflavin synthase | HRUBRI_RS18440 | P51961 | Positive | 4273265 - 4273891 | 21776.4 |
| hypothetical protein | HRUBRI_RS18445 | Not Available | Negative | 4273900 - 4274106 | 7413.97 |
| tetratricopeptide repeat protein | HRUBRI_RS18450 | Not Available | Negative | 4274424 - 4276055 | 62158.0 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein | HRUBRI_RS18455 | P93844 | Negative | 4276060 - 4278078 | 75514.5 |
| type vi secretion system vgr family protein | HRUBRI_RS18460 | Not Available | Negative | 4278029 - 4280734 | 100059.0 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | HRUBRI_RS18465 | A0A0D2YG02 | Positive | 4281035 - 4282324 | 46393.0 |
| nad-dependent protein deacetylase | HRUBRI_RS18470 | Q7WLE5 | Negative | 4282554 - 4283441 | 31443.8 |
| duf3311 domain-containing protein | HRUBRI_RS18475 | Not Available | Positive | 4283612 - 4283791 | 7084.92 |
| monocarboxylate uptake permease mctp | HRUBRI_RS18480 | Q1M7A2 | Positive | 4283791 - 4285284 | 53053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



