Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | HRUBRI_RS18240 | Not Available | Negative | 4231248 - 4231802 | 20656.7 |
| alanine--trna ligase | HRUBRI_RS18245 | Q8Y193 | Negative | 4231831 - 4234455 | 94430.5 |
| hypothetical protein | HRUBRI_RS18250 | Not Available | Negative | 4234767 - 4234985 | 7560.7 |
| glycerophosphodiester phosphodiesterase | HRUBRI_RS18255 | P10908 | Negative | 4235227 - 4235970 | 27095.4 |
| 2tm domain-containing protein | HRUBRI_RS18260 | Not Available | Positive | 4236158 - 4236469 | 11627.1 |
| sensor histidine kinase | HRUBRI_RS18265 | Q8EQQ2 | Positive | 4236519 - 4237661 | 41780.3 |
| lyttr family dna-binding domain-containing protein | HRUBRI_RS18270 | Q87K77 | Positive | 4237677 - 4238477 | 29801.1 |
| hypothetical protein | HRUBRI_RS25220 | Not Available | Negative | 4238782 - 4238922 | 4992.19 |
| glutamine--trna ligase/yqey domain fusion protein | HRUBRI_RS18275 | Q1LQ72 | Positive | 4239187 - 4240938 | 66736.5 |
| hypothetical protein | HRUBRI_RS18280 | Not Available | Positive | 4241061 - 4241423 | 13368.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



