Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:flavin oxidoreductase/nadh oxidase | HRUBRI_RS17480 | C5D427 | Positive | 4033574 - 4034692 | 39797.6 |
| deda family protein | HRUBRI_RS17485 | P0ABP7 | Negative | 4034769 - 4035410 | 23654.7 |
| hypothetical protein | HRUBRI_RS17490 | Not Available | Positive | 4035657 - 4035962 | 11223.1 |
| gntr family transcriptional regulator | HRUBRI_RS17495 | Not Available | Negative | 4035990 - 4036694 | 25446.4 |
| abc transporter substrate-binding protein | HRUBRI_RS17500 | Not Available | Positive | 4037094 - 4038395 | 47133.3 |
| branched-chain amino acid abc transporter permease | HRUBRI_RS17505 | Not Available | Positive | 4038508 - 4039383 | 31081.8 |
| branched-chain amino acid abc transporter atp-binding protein/permease | HRUBRI_RS17510 | Not Available | Positive | 4039394 - 4041925 | 91285.9 |
| sdr family oxidoreductase | HRUBRI_RS17515 | Not Available | Positive | 4041993 - 4042778 | 27495.2 |
| 3-hydroxyacyl-coa dehydrogenase | HRUBRI_RS17520 | Q8SPX7 | Positive | 4042789 - 4043721 | 34192.1 |
| 3-keto-5-aminohexanoate cleavage protein | HRUBRI_RS17525 | Q8RHX2 | Positive | 4043759 - 4044691 | 34191.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



