Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | HRUBRI_RS01450 | Q8G2M6 | Negative | 331748 - 334981 | 115636.0 |
| efflux rnd transporter periplasmic adaptor subunit | HRUBRI_RS01455 | D4I6V2 | Negative | 335084 - 336280 | 41666.7 |
| alpha/beta hydrolase fold domain-containing protein | HRUBRI_RS01460 | P71668 | Negative | 336291 - 337289 | 35937.8 |
| lysr family transcriptional regulator | HRUBRI_RS01465 | Not Available | Positive | 337435 - 338448 | 38051.8 |
| arac family transcriptional regulator | HRUBRI_RS01470 | Q46855 | Positive | 338748 - 339752 | 37636.5 |
| aldo/keto reductase | HRUBRI_RS01475 | O23016 | Positive | 339810 - 340817 | 37602.9 |
| type ii toxin-antitoxin system rele/pare family toxin | HRUBRI_RS01480 | Not Available | Negative | 340895 - 341209 | 11671.9 |
| type ii toxin-antitoxin system pard family antitoxin | HRUBRI_RS01485 | Not Available | Negative | 341206 - 341475 | 9925.73 |
| hpch/hpai aldolase/citrate lyase family protein | HRUBRI_RS01490 | A7ZS18 | Negative | 341568 - 342320 | 27006.7 |
| d-amino acid dehydrogenase | HRUBRI_RS01495 | Q8XX54 | Negative | 342407 - 343672 | 46158.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



