Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxyglucarate dehydratase | HRUBRI_RS16035 | B1J9C7 | Positive | 3695757 - 3696677 | 33185.9 |
| methyl-accepting chemotaxis protein | HRUBRI_RS16040 | Not Available | Negative | 3696824 - 3698608 | 62547.6 |
| beta-propeller fold lactonase family protein | HRUBRI_RS16045 | A8GBC1 | Negative | 3698883 - 3699941 | 37627.1 |
| galactarate dehydratase | HRUBRI_RS16050 | Not Available | Negative | 3700040 - 3701608 | 56260.6 |
| mfs transporter | HRUBRI_RS16055 | P42237 | Negative | 3701687 - 3703027 | 48319.1 |
| permease | HRUBRI_RS16060 | P45468 | Positive | 3703397 - 3704464 | 37581.3 |
| trna 2-selenouridine(34) synthase mnmh | HRUBRI_RS16065 | Q7WE96 | Negative | 3704492 - 3705583 | 40913.3 |
| selenide, water dikinase seld | HRUBRI_RS16070 | Q889F7 | Negative | 3705583 - 3706617 | 36084.5 |
| Trna-asn | Not Available | Not Available | Positive | 3706855 - 3706930 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 3707114 - 3707189 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



