Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | HRUBRI_RS14750 | P80668 | Negative | 3378652 - 3380091 | 50796.0 |
| primary-amine oxidase | HRUBRI_RS14755 | P80695 | Negative | 3380163 - 3382436 | 84129.2 |
| porin | HRUBRI_RS14760 | Not Available | Negative | 3382871 - 3383992 | 38987.9 |
| abc transporter permease | HRUBRI_RS14765 | P73009 | Positive | 3384292 - 3385425 | 40202.8 |
| abc transporter atp-binding protein | HRUBRI_RS14770 | Not Available | Positive | 3385419 - 3386267 | 29907.1 |
| mlad family protein | HRUBRI_RS14775 | Not Available | Positive | 3386267 - 3387184 | 32157.7 |
| abc-type transport auxiliary lipoprotein family protein | HRUBRI_RS14780 | Not Available | Positive | 3387181 - 3387801 | 22068.6 |
| lysr family transcriptional regulator | HRUBRI_RS14785 | Not Available | Positive | 3387906 - 3388817 | 33899.8 |
| lrgb family protein | HRUBRI_RS14790 | P42102 | Negative | 3388828 - 3389568 | 25940.6 |
| cida/lrga family protein | HRUBRI_RS14795 | Not Available | Negative | 3389568 - 3389948 | 13069.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



