Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate decarboxylase subunit alpha | HRUBRI_RS14010 | O06924 | Negative | 3211429 - 3213096 | 60738.9 |
| trap transporter large permease | HRUBRI_RS14015 | Q9HU16 | Negative | 3213097 - 3214446 | 47451.5 |
| trap transporter small permease | HRUBRI_RS14020 | Not Available | Negative | 3214443 - 3215021 | 21000.0 |
| trap transporter substrate-binding protein dctp | HRUBRI_RS14025 | Q21XD7 | Negative | 3215018 - 3216040 | 36694.4 |
| gntr family transcriptional regulator | HRUBRI_RS14030 | P76114 | Positive | 3216188 - 3216856 | 24999.1 |
| pseudouridine synthase | HRUBRI_RS14035 | P72970 | Negative | 3216882 - 3217781 | 34567.9 |
| type ii toxin-antitoxin system hipa family toxin | HRUBRI_RS14040 | P55564 | Negative | 3217778 - 3219115 | 48636.4 |
| helix-turn-helix domain-containing protein | HRUBRI_RS14045 | Not Available | Negative | 3219112 - 3219414 | 10582.0 |
| yjfb family protein | HRUBRI_RS14050 | Not Available | Negative | 3219635 - 3219823 | 6302.62 |
| type ii toxin-antitoxin system rele/pare family toxin | HRUBRI_RS14055 | Not Available | Positive | 3220030 - 3220407 | 13979.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



