Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin triphosphate diphosphatase | HRUBRI_RS01095 | P0AFC1 | Positive | 240639 - 241142 | 18917.2 |
| endonuclease/exonuclease/phosphatase family protein | HRUBRI_RS01100 | P0AAW3 | Positive | 241197 - 241994 | 29609.6 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein | HRUBRI_RS01105 | Q8Z883 | Positive | 241997 - 243160 | 43547.6 |
| acetyl-coa c-acetyltransferase | HRUBRI_RS01110 | P14611 | Positive | 243297 - 244472 | 40423.1 |
| transporter substrate-binding domain-containing protein | HRUBRI_RS01115 | G3XD47 | Negative | 244558 - 245367 | 29201.9 |
| amino acid abc transporter atp-binding protein | HRUBRI_RS01120 | Not Available | Negative | 245425 - 246153 | 26390.2 |
| amino acid abc transporter permease | HRUBRI_RS01125 | P42399 | Negative | 246137 - 246784 | 23437.2 |
| amino acid abc transporter permease | HRUBRI_RS01130 | O34671 | Negative | 246797 - 247480 | 24857.1 |
| alpha-hydroxy acid oxidase | HRUBRI_RS01135 | P20932 | Negative | 247519 - 248694 | 42719.6 |
| fadr/gntr family transcriptional regulator | HRUBRI_RS01140 | Not Available | Positive | 248908 - 249621 | 26781.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



