Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HRUBRI_RS12935 | Not Available | Positive | 2968177 - 2968671 | 18279.0 |
| hypothetical protein | HRUBRI_RS12940 | Not Available | Positive | 2968697 - 2969098 | 15009.1 |
| is3 family transposase | HRUBRI_RS12945 | Not Available | Negative | 2969537 - 2970768 | 46771.5 |
| ynce family protein | HRUBRI_RS24885 | Not Available | Positive | 2970953 - 2971504 | 20487.6 |
| hypothetical protein | HRUBRI_RS12955 | Not Available | Positive | 2971558 - 2972691 | 41929.7 |
| hypothetical protein | HRUBRI_RS12960 | Not Available | Negative | 2972781 - 2974151 | 48982.5 |
| nucleotide excision repair endonuclease | HRUBRI_RS12965 | Q8XDZ7 | Negative | 2974263 - 2975327 | 39500.9 |
| dna ligase d | HRUBRI_RS12970 | Q9I1X7 | Negative | 2975521 - 2978106 | 95165.6 |
| ku protein | HRUBRI_RS12975 | Q0JYN7 | Negative | 2978103 - 2979092 | 36808.0 |
| thiamine pyrophosphate-binding protein | HRUBRI_RS12980 | P07003 | Positive | 2979337 - 2981031 | 60210.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



