Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | HRUBRI_RS12830 | Not Available | Negative | 2942195 - 2942932 | 26755.5 |
| gntr family transcriptional regulator | HRUBRI_RS12835 | Not Available | Positive | 2943195 - 2943917 | 27001.2 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | HRUBRI_RS12840 | Q937N8 | Positive | 2943971 - 2946592 | 95622.1 |
| 2-methylaconitate cis-trans isomerase prpf | HRUBRI_RS12845 | Q937N7 | Positive | 2946589 - 2947779 | 41584.8 |
| d-lactate dehydrogenase | HRUBRI_RS12850 | P06149 | Negative | 2947789 - 2949483 | 62913.3 |
| abc transporter permease | HRUBRI_RS12855 | Not Available | Negative | 2949494 - 2950504 | 35384.8 |
| sugar abc transporter atp-binding protein | HRUBRI_RS12860 | Q8UBN2 | Negative | 2950539 - 2952062 | 55256.1 |
| sugar abc transporter substrate-binding protein | HRUBRI_RS12865 | Not Available | Negative | 2952098 - 2953177 | 39607.4 |
| ribose-5-phosphate isomerase rpia | HRUBRI_RS12870 | Q8ZGJ9 | Negative | 2953344 - 2954057 | 26173.5 |
| murr/rpir family transcriptional regulator | HRUBRI_RS12875 | Q39IQ1 | Negative | 2954111 - 2954950 | 30874.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



