Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-dihydroxyphenylpropionate 1,2-dioxygenase | HRUBRI_RS11865 | P22636 | Negative | 2747373 - 2748200 | 30016.7 |
| subunit of meta cleavage enzyme | HRUBRI_RS11870 | Not Available | Negative | 2748193 - 2748498 | 11330.7 |
| s9 family peptidase | HRUBRI_RS11875 | Not Available | Negative | 2748495 - 2749658 | 42534.5 |
| fad-dependent oxidoreductase | HRUBRI_RS11880 | H1ZZA4 | Positive | 2749929 - 2751050 | 40515.3 |
| amidohydrolase family protein | HRUBRI_RS11885 | Q2RJW1 | Positive | 2751143 - 2752645 | 53190.0 |
| iscs subfamily cysteine desulfurase | HRUBRI_RS11890 | Not Available | Positive | 2753309 - 2754532 | 44416.3 |
| fe-s cluster assembly scaffold iscu | HRUBRI_RS11895 | Not Available | Positive | 2754546 - 2754995 | 15944.9 |
| iron-sulfur cluster insertion protein erpa | HRUBRI_RS11900 | A1TUF2 | Positive | 2755039 - 2755401 | 12747.7 |
| iron-sulfur cluster assembly protein isca | HRUBRI_RS11905 | C5BEU3 | Positive | 2755414 - 2755734 | 11484.6 |
| fe-s protein assembly chaperone hsca | HRUBRI_RS11910 | Q1H365 | Positive | 2755738 - 2757666 | 67952.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



