Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hoxn/hupn/nixa family nickel/cobalt transporter | HRUBRI_RS11760 | P23516 | Positive | 2726311 - 2727378 | 39390.2 |
| nickel-responsive transcriptional regulator nikr | HRUBRI_RS11765 | Q01RT6 | Positive | 2727438 - 2727911 | 17671.0 |
| alpha/beta hydrolase | HRUBRI_RS11770 | Not Available | Negative | 2727966 - 2729057 | 41428.9 |
| duf2946 domain-containing protein | HRUBRI_RS24435 | Not Available | Negative | 2729253 - 2729639 | 13297.3 |
| copper homeostasis membrane protein copd | HRUBRI_RS11780 | P76278 | Negative | 2729795 - 2730667 | 31532.2 |
| copper homeostasis periplasmic binding protein copc | HRUBRI_RS11785 | P0AA58 | Negative | 2730676 - 2731041 | 12755.5 |
| purine nucleoside permease | HRUBRI_RS11790 | O74493 | Positive | 2731364 - 2732410 | 38161.1 |
| acyl-coa dehydrogenase family protein | HRUBRI_RS11795 | Q845S8 | Positive | 2732582 - 2733763 | 41861.5 |
| eal domain-containing protein | HRUBRI_RS11800 | Not Available | Positive | 2733861 - 2736503 | 97507.9 |
| hypothetical protein | HRUBRI_RS11805 | Not Available | Negative | 2736535 - 2736834 | 10961.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



