Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HRUBRI_RS11660 | Not Available | Positive | 2700060 - 2700443 | 13780.9 |
| type vi secretion system baseplate subunit tssf | HRUBRI_RS11665 | Q9I744 | Positive | 2700508 - 2702334 | 68464.8 |
| type vi secretion system baseplate subunit tssg | HRUBRI_RS11670 | Not Available | Positive | 2702298 - 2703383 | 39377.7 |
| contractile injection system protein, vgrg/pvc8 family | HRUBRI_RS25530 | Not Available | Positive | 2703380 - 2706448 | 106821.0 |
| duf2169 domain-containing protein | HRUBRI_RS11680 | Not Available | Positive | 2706456 - 2709191 | 98852.3 |
| pentapeptide repeat-containing protein | HRUBRI_RS11685 | Not Available | Positive | 2709188 - 2710276 | 40299.7 |
| duf3540 domain-containing protein | HRUBRI_RS11690 | Not Available | Positive | 2710273 - 2710830 | 19913.9 |
| duf4150 domain-containing protein | HRUBRI_RS11695 | Not Available | Positive | 2710857 - 2711249 | 13126.0 |
| hypothetical protein | HRUBRI_RS11700 | Not Available | Positive | 2711252 - 2711767 | 17940.2 |
| type vi secretion system baseplate subunit tssk | HRUBRI_RS11705 | Not Available | Positive | 2711832 - 2713280 | 53183.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



