Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HRUBRI_RS11175 | Not Available | Negative | 2543001 - 2543387 | 13922.7 |
| carbohydrate porin | HRUBRI_RS11180 | Not Available | Negative | 2543432 - 2544763 | 48958.5 |
| efflux transporter outer membrane subunit | HRUBRI_RS11185 | P15727 | Negative | 2544801 - 2546282 | 52008.7 |
| efflux rnd transporter permease subunit | HRUBRI_RS11190 | P94177 | Negative | 2546296 - 2549400 | 113028.0 |
| efflux rnd transporter periplasmic adaptor subunit | HRUBRI_RS11195 | P37973 | Negative | 2549393 - 2550538 | 40610.8 |
| response regulator transcription factor | HRUBRI_RS11200 | Not Available | Positive | 2550776 - 2551453 | 25333.9 |
| cell wall metabolism sensor histidine kinase walk | HRUBRI_RS11205 | P0DMK6 | Positive | 2551456 - 2552877 | 50353.6 |
| cytochrome b | HRUBRI_RS11210 | Not Available | Negative | 2552921 - 2553487 | 21217.1 |
| hamp domain-containing sensor histidine kinase | HRUBRI_RS11215 | P40719 | Negative | 2553567 - 2554922 | 48840.2 |
| response regulator transcription factor | HRUBRI_RS11220 | Not Available | Negative | 2554919 - 2555590 | 24474.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



