Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nadp(+)) | HRUBRI_RS00795 | Q6FFQ0 | Positive | 172108 - 173697 | 55336.7 |
| abc transporter substrate-binding protein | HRUBRI_RS00800 | Not Available | Positive | 173815 - 175026 | 43520.9 |
| carboxymuconolactone decarboxylase family protein | HRUBRI_RS00805 | P96684 | Negative | 175172 - 175633 | 17243.6 |
| rna polymerase sigma factor sigj | HRUBRI_RS00810 | L0TCG5 | Negative | 175756 - 176715 | 35844.9 |
| porphobilinogen synthase | HRUBRI_RS00815 | Q59643 | Negative | 176738 - 177757 | 37000.6 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | HRUBRI_RS00820 | A4G9Q7 | Negative | 178050 - 178760 | 26170.9 |
| cytochrome c | HRUBRI_RS00825 | P43302 | Positive | 178966 - 179628 | 23289.7 |
| cytochrome c biogenesis protein resb | HRUBRI_RS00830 | Not Available | Positive | 179910 - 182063 | 78998.9 |
| c-type cytochrome biogenesis protein ccsb | HRUBRI_RS00835 | P56315 | Positive | 182164 - 183318 | 43194.3 |
| had family phosphatase | HRUBRI_RS00840 | P31467 | Positive | 183383 - 184030 | 23321.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



