Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | HRUBRI_RS10385 | A6SZQ1 | Positive | 2362973 - 2363713 | 27140.9 |
| translation elongation factor ts | HRUBRI_RS10390 | A6SZQ0 | Positive | 2363851 - 2364738 | 31405.8 |
| ump kinase | HRUBRI_RS10395 | A6SZP9 | Positive | 2365023 - 2365739 | 25229.8 |
| ribosome recycling factor | HRUBRI_RS10400 | B2UB09 | Positive | 2365856 - 2366416 | 20761.2 |
| polyprenyl diphosphate synthase | HRUBRI_RS10405 | Q82TZ9 | Positive | 2366619 - 2367377 | 28273.9 |
| phosphatidate cytidylyltransferase | HRUBRI_RS10410 | P44937 | Positive | 2367377 - 2368204 | 29822.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | HRUBRI_RS10415 | A6SZP5 | Positive | 2368231 - 2369403 | 41292.1 |
| rip metalloprotease rsep | HRUBRI_RS10420 | Q8XZI4 | Positive | 2369400 - 2370773 | 49348.1 |
| outer membrane protein assembly factor bama | HRUBRI_RS10425 | Q9K1H0 | Positive | 2370961 - 2373342 | 87940.8 |
| omph family outer membrane protein | HRUBRI_RS10430 | Not Available | Positive | 2373388 - 2373897 | 19379.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



