Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase | HRUBRI_RS07595 | Not Available | Positive | 1759578 - 1761821 | 82382.8 |
| cytochrome c | HRUBRI_RS07600 | P00105 | Positive | 1762186 - 1762506 | 11325.6 |
| cytochrome c | HRUBRI_RS07605 | Q52369 | Positive | 1762521 - 1762874 | 12391.7 |
| duf1841 family protein | HRUBRI_RS07610 | Not Available | Negative | 1762947 - 1763378 | 16376.4 |
| branched-chain amino acid abc transporter substrate-binding protein | HRUBRI_RS07615 | Not Available | Positive | 1763672 - 1764832 | 41625.9 |
| endonuclease iii | HRUBRI_RS07620 | P0AB84 | Negative | 1764855 - 1765505 | 24360.6 |
| electron transport complex subunit rsxb | HRUBRI_RS07625 | A1K5F2 | Negative | 1765502 - 1766233 | 25940.0 |
| polyhydroxyalkanoate depolymerase | HRUBRI_RS07630 | Not Available | Negative | 1766373 - 1767608 | 46509.6 |
| nad(p)/fad-dependent oxidoreductase | HRUBRI_RS07635 | Q0K8J6 | Negative | 1767926 - 1768999 | 38953.3 |
| ferredoxin fdxa | HRUBRI_RS07640 | P08811 | Negative | 1769297 - 1769620 | 12130.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



