Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 1,2-dioxygenase | HRUBRI_RS05675 | Not Available | Positive | 1327964 - 1328899 | 33797.1 |
| rieske 2fe-2s domain-containing protein | HRUBRI_RS05680 | Not Available | Positive | 1328999 - 1330372 | 51895.0 |
| benzoate 1,2-dioxygenase small subunit | HRUBRI_RS05685 | P23100 | Positive | 1330369 - 1330863 | 19599.2 |
| benzoate 1,2-dioxygenase electron transfer component benc | HRUBRI_RS05690 | P23101 | Positive | 1330884 - 1331909 | 36122.4 |
| benzoate diol dehydrogenase bend | HRUBRI_RS05695 | P07772 | Positive | 1331906 - 1332694 | 27362.7 |
| rida family protein | HRUBRI_RS05700 | P39332 | Positive | 1332760 - 1333176 | 15223.6 |
| aromatic acid/h+ symport family mfs transporter | HRUBRI_RS05705 | O30513 | Positive | 1333243 - 1334604 | 48090.2 |
| benzoate/h(+) symporter bene family transporter | HRUBRI_RS05710 | P07775 | Positive | 1334730 - 1335899 | 40494.8 |
| gtpase | HRUBRI_RS05715 | P07776 | Positive | 1335917 - 1337197 | 46959.1 |
| dynamin family protein | HRUBRI_RS05720 | P07777 | Positive | 1337194 - 1338756 | 56380.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



