Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | HRUBRI_RS05280 | E9RGS4 | Positive | 1225373 - 1226317 | 34672.6 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | HRUBRI_RS05285 | Q57097 | Positive | 1226420 - 1227280 | 30728.8 |
| dmt family transporter | HRUBRI_RS05290 | P39314 | Negative | 1227307 - 1228245 | 33516.7 |
| duf4337 domain-containing protein | HRUBRI_RS05295 | Not Available | Negative | 1228440 - 1229000 | 19870.0 |
| catalase/peroxidase hpi | HRUBRI_RS05300 | A2RPW9 | Positive | 1229592 - 1231841 | 81171.4 |
| phosphonate degradation hd-domain oxygenase | HRUBRI_RS05305 | D0E8I5 | Positive | 1232018 - 1232587 | 20665.4 |
| arac family transcriptional regulator | HRUBRI_RS05310 | Not Available | Negative | 1232584 - 1233351 | 27826.6 |
| 3-hydroxybutyrate dehydrogenase | HRUBRI_RS05315 | O86034 | Negative | 1233541 - 1234323 | 27524.6 |
| gnat family n-acetyltransferase | HRUBRI_RS05320 | Not Available | Positive | 1234801 - 1235568 | 28670.4 |
| udp-2,3-diacylglucosamine diphosphatase | HRUBRI_RS05325 | Not Available | Positive | 1235565 - 1236455 | 33823.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



