Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase d family protein | HRUBRI_RS04945 | Q9ZCD8 | Positive | 1155935 - 1156510 | 20691.0 |
| mechanosensitive ion channel family protein | HRUBRI_RS04950 | Not Available | Positive | 1156535 - 1157893 | 49874.0 |
| fatty acid desaturase | HRUBRI_RS04955 | Not Available | Positive | 1157976 - 1159172 | 45912.4 |
| 50s ribosomal protein l33 | HRUBRI_RS04960 | A6T146 | Negative | 1159370 - 1159537 | 6356.75 |
| 50s ribosomal protein l28 | HRUBRI_RS04965 | A4G7W0 | Negative | 1159562 - 1159798 | 8756.73 |
| radc family protein | HRUBRI_RS04970 | A4G7V9 | Negative | 1160005 - 1160691 | 25398.6 |
| peptidylprolyl isomerase | HRUBRI_RS04975 | P21863 | Positive | 1160892 - 1161347 | 16471.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | HRUBRI_RS04980 | P58677 | Positive | 1161407 - 1162372 | 34490.7 |
| branched-chain amino acid abc transporter permease | HRUBRI_RS04985 | Not Available | Positive | 1162987 - 1163916 | 32432.4 |
| abc transporter permease subunit | HRUBRI_RS04990 | Not Available | Positive | 1164004 - 1165218 | 43395.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



