Burkholderia cepacia JBK9

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia JBK9 is a Gram-negative bacterium characterized as a microaerophile, meaning it requires oxygen at lower levels than are present in the atmosphere for optimal growth. This organism possesses two replicons, indicating a complex genetic structure that may contribute to its adaptability and metabolic versatility. The genetic information for Burkholderia cepacia JBK9 is cataloged under two accessions: NZ_CP013730.1 and NZ_CP013732.1. These accessions provide a resource for researchers studying the genomics and potential applications of this bacterium. In terms of ecological significance, Burkholderia cepacia species are known for their role in soil and plant rhizospheres, where they can influence plant health and nutrient cycling. The microaerophilic nature of JBK9 suggests it may thrive in environments where oxygen levels fluctuate, such as waterlogged soils or within the root systems of certain plants. Understanding the specific traits of Burkholderia cepacia JBK9 can enhance our knowledge of its ecological roles and potential applications in biotechnology and agriculture, particularly in promoting plant growth or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
StrainJBK9

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia JBK9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia JBK9 chromosome 3, complete sequence.

Gene Summary

Adenine Count

217900 bp

Thymine Count

215538 bp

Guanine Count

427819 bp

Cytosine Count

429135 bp

Genome Length

1290392 bp

Protein-coding Genes

1070 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseP350_RS16560Not AvailableNegative3593163 - 359402929265.8
rnb domain-containing ribonucleaseP350_RS16565Not AvailableNegative3594026 - 359611376014.7
yqia/ycfp family alpha/beta fold hydrolaseP350_RS16570Not AvailableNegative3596194 - 359676320812.7
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseP350_RS16575Not AvailableNegative3596760 - 359814549334.0
hypothetical proteinP350_RS16580Not AvailablePositive3598392 - 359903624091.4
tlpa disulfide reductase family proteinP350_RS16585Not AvailablePositive3599044 - 359959519349.4
type ii 3-dehydroquinate dehydrataseP350_RS16590Not AvailablePositive3599790 - 360024216528.6
acetyl-coa carboxylase biotin carboxyl carrier proteinP350_RS16595Not AvailablePositive3600309 - 360078216149.4
acetyl-coa carboxylase biotin carboxylase subunitP350_RS16600Not AvailablePositive3600868 - 360223550564.9
50s ribosomal protein l11 methyltransferaseP350_RS16605Not AvailablePositive3602238 - 360314032413.4

Displaying genes 4471 – 4480 of 4667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.