Burkholderia cepacia JBK9

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia JBK9 is a Gram-negative bacterium characterized as a microaerophile, meaning it requires oxygen at lower levels than are present in the atmosphere for optimal growth. This organism possesses two replicons, indicating a complex genetic structure that may contribute to its adaptability and metabolic versatility. The genetic information for Burkholderia cepacia JBK9 is cataloged under two accessions: NZ_CP013730.1 and NZ_CP013732.1. These accessions provide a resource for researchers studying the genomics and potential applications of this bacterium. In terms of ecological significance, Burkholderia cepacia species are known for their role in soil and plant rhizospheres, where they can influence plant health and nutrient cycling. The microaerophilic nature of JBK9 suggests it may thrive in environments where oxygen levels fluctuate, such as waterlogged soils or within the root systems of certain plants. Understanding the specific traits of Burkholderia cepacia JBK9 can enhance our knowledge of its ecological roles and potential applications in biotechnology and agriculture, particularly in promoting plant growth or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
StrainJBK9

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia JBK9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia JBK9 chromosome 3, complete sequence.

Gene Summary

Adenine Count

217900 bp

Thymine Count

215538 bp

Guanine Count

427819 bp

Cytosine Count

429135 bp

Genome Length

1290392 bp

Protein-coding Genes

1070 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylaseP350_RS14955Not AvailablePositive3226026 - 322655319511.1
trna (guanosine(46)-n7)-methyltransferase trmbP350_RS14960Not AvailablePositive3226902 - 322766928459.9
isl3 family transposaseP350_RS14965Not AvailablePositive3227781 - 322900147661.9
undecaprenyl-diphosphate phosphataseP350_RS14970Not AvailableNegative3229076 - 322990630299.6
duf1439 domain-containing proteinP350_RS14975Not AvailableNegative3229986 - 323056720580.9
ykgj family cysteine cluster proteinP350_RS14980Not AvailableNegative3230564 - 323089011082.4
oxygen-independent coproporphyrinogen iii oxidaseP350_RS14985Not AvailablePositive3231050 - 323244151224.1
hypothetical proteinP350_RS14990Not AvailablePositive3232514 - 32327719396.37
protein-l-isoaspartate o-methyltransferaseP350_RS14995Not AvailablePositive3232876 - 323353224202.3
rhodanese-like domain-containing proteinP350_RS15000Not AvailablePositive3233547 - 323387011855.2

Displaying genes 4141 – 4150 of 4667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.