Burkholderia cepacia JBK9

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia JBK9 is a Gram-negative bacterium characterized as a microaerophile, meaning it requires oxygen at lower levels than are present in the atmosphere for optimal growth. This organism possesses two replicons, indicating a complex genetic structure that may contribute to its adaptability and metabolic versatility. The genetic information for Burkholderia cepacia JBK9 is cataloged under two accessions: NZ_CP013730.1 and NZ_CP013732.1. These accessions provide a resource for researchers studying the genomics and potential applications of this bacterium. In terms of ecological significance, Burkholderia cepacia species are known for their role in soil and plant rhizospheres, where they can influence plant health and nutrient cycling. The microaerophilic nature of JBK9 suggests it may thrive in environments where oxygen levels fluctuate, such as waterlogged soils or within the root systems of certain plants. Understanding the specific traits of Burkholderia cepacia JBK9 can enhance our knowledge of its ecological roles and potential applications in biotechnology and agriculture, particularly in promoting plant growth or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
StrainJBK9

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia JBK9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia JBK9 chromosome 3, complete sequence.

Gene Summary

Adenine Count

217900 bp

Thymine Count

215538 bp

Guanine Count

427819 bp

Cytosine Count

429135 bp

Genome Length

1290392 bp

Protein-coding Genes

1070 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenase accessory sulfurtransferase fdhdP350_RS04450Not AvailableNegative964779 - 96563330157.2
nitrate reductase associated proteinP350_RS04455Not AvailablePositive965748 - 96623018533.1
acyl-coa thioesteraseP350_RS04460Not AvailableNegative966274 - 96666914267.2
abc transporter atp-binding protein/permeaseP350_RS04465Not AvailablePositive966845 - 96871669368.6
n-acetylmuramate alpha-1-phosphate uridylyltransferase muruP350_RS04470Not AvailableNegative968813 - 96953225546.7
aminoglycoside phosphotransferase family proteinP350_RS04475Not AvailableNegative969565 - 97061439054.9
lps-assembly protein lptdP350_RS04480Not AvailablePositive970838 - 97319887145.1
peptidylprolyl isomeraseP350_RS04485Not AvailablePositive973250 - 97460849127.0
4-hydroxythreonine-4-phosphate dehydrogenase pdxaP350_RS04490Not AvailablePositive974620 - 97560934154.0
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaP350_RS04495Not AvailablePositive975659 - 97648630415.9

Displaying genes 2041 – 2050 of 4667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.