Burkholderia cepacia JBK9

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia JBK9 is a Gram-negative bacterium characterized as a microaerophile, meaning it requires oxygen at lower levels than are present in the atmosphere for optimal growth. This organism possesses two replicons, indicating a complex genetic structure that may contribute to its adaptability and metabolic versatility. The genetic information for Burkholderia cepacia JBK9 is cataloged under two accessions: NZ_CP013730.1 and NZ_CP013732.1. These accessions provide a resource for researchers studying the genomics and potential applications of this bacterium. In terms of ecological significance, Burkholderia cepacia species are known for their role in soil and plant rhizospheres, where they can influence plant health and nutrient cycling. The microaerophilic nature of JBK9 suggests it may thrive in environments where oxygen levels fluctuate, such as waterlogged soils or within the root systems of certain plants. Understanding the specific traits of Burkholderia cepacia JBK9 can enhance our knowledge of its ecological roles and potential applications in biotechnology and agriculture, particularly in promoting plant growth or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
StrainJBK9

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia JBK9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia JBK9 chromosome 3, complete sequence.

Gene Summary

Adenine Count

217900 bp

Thymine Count

215538 bp

Guanine Count

427819 bp

Cytosine Count

429135 bp

Genome Length

1290392 bp

Protein-coding Genes

1070 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sgnh/gdsl hydrolase family proteinP350_RS01425Not AvailablePositive292071 - 29277824693.9
oxidoreductaseP350_RS01430Not AvailablePositive293023 - 29407537966.2
hypothetical proteinP350_RS01435Not AvailablePositive294276 - 29464413462.1
glycine cleavage system aminomethyltransferase gcvtP350_RS01440Not AvailablePositive295119 - 29623740003.8
glycine cleavage system protein gcvhP350_RS01445Not AvailablePositive296355 - 29673513337.5
aminomethyl-transferring glycine dehydrogenaseP350_RS01450Not AvailablePositive296801 - 299728104210.0
alginate lyase family proteinP350_RS01455Not AvailablePositive299880 - 30102241786.0
l-serine ammonia-lyaseP350_RS01460Not AvailablePositive301053 - 30244148811.7
type ii toxin-antitoxin system vapc family toxinP350_RS01465Not AvailableNegative302511 - 30291214918.8
type ii toxin-antitoxin system vapb family antitoxinP350_RS01470Not AvailableNegative302912 - 3031489028.63

Displaying genes 1421 – 1430 of 4667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.