Burkholderia cepacia JBK9

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia JBK9 is a Gram-negative bacterium characterized as a microaerophile, meaning it requires oxygen at lower levels than are present in the atmosphere for optimal growth. This organism possesses two replicons, indicating a complex genetic structure that may contribute to its adaptability and metabolic versatility. The genetic information for Burkholderia cepacia JBK9 is cataloged under two accessions: NZ_CP013730.1 and NZ_CP013732.1. These accessions provide a resource for researchers studying the genomics and potential applications of this bacterium. In terms of ecological significance, Burkholderia cepacia species are known for their role in soil and plant rhizospheres, where they can influence plant health and nutrient cycling. The microaerophilic nature of JBK9 suggests it may thrive in environments where oxygen levels fluctuate, such as waterlogged soils or within the root systems of certain plants. Understanding the specific traits of Burkholderia cepacia JBK9 can enhance our knowledge of its ecological roles and potential applications in biotechnology and agriculture, particularly in promoting plant growth or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
StrainJBK9

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia JBK9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia JBK9 chromosome 3, complete sequence.

Gene Summary

Adenine Count

217900 bp

Thymine Count

215538 bp

Guanine Count

427819 bp

Cytosine Count

429135 bp

Genome Length

1290392 bp

Protein-coding Genes

1070 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinP350_RS37465Not AvailableNegative1247910 - 12481589458.83
phytanoyl-coa dioxygenase family proteinP350_RS37470Not AvailableNegative1248545 - 124940531937.1
atp-dependent clp protease atp-binding subunitP350_RS37475Not AvailableNegative1249584 - 125179179710.9
nad(p)/fad-dependent oxidoreductaseP350_RS37480Not AvailableNegative1251832 - 125324451825.6
cupin domain-containing proteinP350_RS37485Not AvailableNegative1253352 - 125371413218.6
type 1 glutamine amidotransferase domain-containing proteinP350_RS37490Not AvailableNegative1253869 - 125454623976.6
cupin domain-containing proteinP350_RS37495Not AvailableNegative1254603 - 125504316571.6
helix-turn-helix domain-containing proteinP350_RS37500Not AvailableNegative1255499 - 125644934796.1
cytosine permeaseP350_RS37505Not AvailableNegative1256897 - 125840253983.5
ycf48-related proteinP350_RS37510Not AvailableNegative1258511 - 125947633428.9

Displaying genes 1041 – 1050 of 4667 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.