Roseateles depolymerans strain KCTC 42856

rodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Roseateles

Description

Roseateles depolymerans strain KCTC 42856 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, indicating a streamlined genomic organization that may facilitate efficient cellular processes. The genomic information for this strain can be accessed under the accession number NZ_CP013729.1. The classification of R. depolymerans as Gram-negative suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a common feature among many bacteria in this group. This structural characteristic often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to form biofilms. Understanding the traits of R. depolymerans strain KCTC 42856 contributes to our knowledge of microbial diversity and the ecological roles these organisms may play. Gram-negative bacteria, including this strain, are often involved in biogeochemical cycles and can participate in the degradation of complex organic compounds. This capability is particularly relevant in the context of environmental microbiology, where such bacteria may be utilized in bioremediation efforts to break down pollutants. Thus, the traits of R. depolymerans strain KCTC 42856 highlight its potential significance in ecological processes and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRoseateles
SpeciesRoseateles depolymerans
Strainstrain KCTC 42856

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseateles depolymerans strain KCTC 42856


Gene Summary

Adenine Count

950277 bp

Thymine Count

949282 bp

Guanine Count

1894186 bp

Cytosine Count

1887977 bp

Genome Length

5681722 bp

Protein-coding Genes

4871 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gfo/idh/moca family proteinRD2015_RS00300Not AvailablePositive72890 - 7391536854.4
bax inhibitor-1/ycca family proteinRD2015_RS00305Not AvailableNegative74042 - 7474924576.5
lysr family transcriptional regulatorRD2015_RS00310Not AvailableNegative74859 - 7582135000.0
hypothetical proteinRD2015_RS00315Not AvailablePositive76181 - 763757191.61
plp-dependent aspartate aminotransferase family proteinRD2015_RS00320Not AvailableNegative76406 - 7759942736.8
pyridoxal-phosphate dependent enzymeRD2015_RS00325Not AvailableNegative77596 - 7894548512.1
abc transporter permeaseRD2015_RS00330Not AvailableNegative79688 - 8056331652.3
abc transporter atp-binding proteinRD2015_RS00335Not AvailableNegative80560 - 8156136054.3
abc transporter substrate-binding proteinRD2015_RS00340Not AvailableNegative81572 - 8257035658.7
taud/tfda family dioxygenaseRD2015_RS00345Not AvailableNegative82704 - 8365135311.8

Displaying genes 61 – 70 of 4944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.