Roseateles depolymerans strain KCTC 42856

rodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Roseateles

Description

Roseateles depolymerans strain KCTC 42856 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, indicating a streamlined genomic organization that may facilitate efficient cellular processes. The genomic information for this strain can be accessed under the accession number NZ_CP013729.1. The classification of R. depolymerans as Gram-negative suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a common feature among many bacteria in this group. This structural characteristic often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to form biofilms. Understanding the traits of R. depolymerans strain KCTC 42856 contributes to our knowledge of microbial diversity and the ecological roles these organisms may play. Gram-negative bacteria, including this strain, are often involved in biogeochemical cycles and can participate in the degradation of complex organic compounds. This capability is particularly relevant in the context of environmental microbiology, where such bacteria may be utilized in bioremediation efforts to break down pollutants. Thus, the traits of R. depolymerans strain KCTC 42856 highlight its potential significance in ecological processes and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRoseateles
SpeciesRoseateles depolymerans
Strainstrain KCTC 42856

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseateles depolymerans strain KCTC 42856 chromosome, complete

Gene Summary

Adenine Count

950277 bp

Thymine Count

949282 bp

Guanine Count

1894186 bp

Cytosine Count

1887977 bp

Genome Length

5681722 bp

Protein-coding Genes

4871 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine synthaseRD2015_RS18020Not AvailablePositive4218732 - 421936723600.6
sdr family nad(p)-dependent oxidoreductaseRD2015_RS18025Not AvailablePositive4219377 - 422023730118.6
cobd/cbib family proteinRD2015_RS18030Not AvailableNegative4220265 - 422125435997.0
coa pyrophosphataseRD2015_RS18035Not AvailableNegative4221306 - 422203426518.9
50s ribosomal protein l19RD2015_RS18040Not AvailableNegative4222200 - 422255313244.2
trna (guanosine(37)-n1)-methyltransferase trmdRD2015_RS18045Not AvailableNegative4222855 - 422364329171.8
ribosome maturation factor rimmRD2015_RS18050Not AvailableNegative4223722 - 422434222360.6
30s ribosomal protein s16RD2015_RS18055Not AvailableNegative4224368 - 42246379602.59
acyl-coa dehydrogenase family proteinRD2015_RS18060Not AvailablePositive4224917 - 422545919959.9
tm2 domain-containing proteinRD2015_RS18065Not AvailablePositive4225576 - 422604617263.9

Displaying genes 3691 – 3700 of 4944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.