Roseateles depolymerans strain KCTC 42856

rodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Roseateles

Description

Roseateles depolymerans strain KCTC 42856 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, indicating a streamlined genomic organization that may facilitate efficient cellular processes. The genomic information for this strain can be accessed under the accession number NZ_CP013729.1. The classification of R. depolymerans as Gram-negative suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a common feature among many bacteria in this group. This structural characteristic often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to form biofilms. Understanding the traits of R. depolymerans strain KCTC 42856 contributes to our knowledge of microbial diversity and the ecological roles these organisms may play. Gram-negative bacteria, including this strain, are often involved in biogeochemical cycles and can participate in the degradation of complex organic compounds. This capability is particularly relevant in the context of environmental microbiology, where such bacteria may be utilized in bioremediation efforts to break down pollutants. Thus, the traits of R. depolymerans strain KCTC 42856 highlight its potential significance in ecological processes and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRoseateles
SpeciesRoseateles depolymerans
Strainstrain KCTC 42856

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseateles depolymerans strain KCTC 42856 chromosome, complete

Gene Summary

Adenine Count

950277 bp

Thymine Count

949282 bp

Guanine Count

1894186 bp

Cytosine Count

1887977 bp

Genome Length

5681722 bp

Protein-coding Genes

4871 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRD2015_RS11880Not AvailablePositive2783870 - 278428914653.9
tonb-dependent receptorRD2015_RS11885Not AvailablePositive2784627 - 278699982000.0
pyridoxamine 5'-phosphate oxidaseRD2015_RS11890Not AvailableNegative2787100 - 278773524111.4
ntp transferase domain-containing proteinRD2015_RS11895Not AvailablePositive2787881 - 278854923472.3
gamma-glutamylcyclotransferaseRD2015_RS11900Not AvailableNegative2788597 - 278927425328.3
dmt family transporterRD2015_RS11905Not AvailableNegative2789349 - 279025431520.3
phosphogluconate dehydrataseRD2015_RS11910Not AvailablePositive2790394 - 279221464224.2
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseRD2015_RS11915Not AvailablePositive2792250 - 279288521346.0
arsenate reductase (glutaredoxin)RD2015_RS11920Not AvailableNegative2792968 - 279339015024.3
exodeoxyribonuclease iiiRD2015_RS11925Not AvailableNegative2793412 - 279418528918.5

Displaying genes 2421 – 2430 of 4944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.