Burkholderia ubonensis strain MSMB0783

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia ubonensis strain MSMB0783 is characterized by possessing two replicons, which are essential for its genomic organization and adaptability. The strain has been sequenced, with its genomic information available under accession numbers NZ_CP013420.1 and NZ_CP013422.1. This bacterium belongs to the Burkholderia genus, known for its ecological versatility and ability to thrive in diverse environments. Members of this genus are often associated with soil, plant rhizospheres, and even clinical settings, where some species are recognized as pathogens. The specific traits of B. ubonensis strain MSMB0783 may provide insights into its ecological role, potentially contributing to nutrient cycling in its environment or engaging in symbiotic relationships with plants. The presence of two replicons could indicate a complex regulatory system that enables the strain to adapt to various environmental stresses or metabolic conditions. This genomic arrangement may also facilitate horizontal gene transfer, allowing for the acquisition of new traits that could enhance its survival and competitiveness in different habitats. Understanding the genomic features of Burkholderia ubonensis strain MSMB0783 contributes to a broader comprehension of the ecological dynamics of the Burkholderia genus, as well as their potential applications in biotechnology and agriculture. The strain's ability to thrive in different environments underscores the importance of microbial diversity in ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia ubonensis
Strainstrain MSMB0783

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia ubonensis strain MSMB0783 chromosome 1, complete

Gene Summary

Adenine Count

531952 bp

Thymine Count

538461 bp

Guanine Count

1097110 bp

Cytosine Count

1100824 bp

Genome Length

3268347 bp

Protein-coding Genes

2924 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxalate decarboxylase family bicupinWJ35_RS25410Not AvailableNegative1284808 - 128606445737.8
type ii toxin-antitoxin system hipa family toxinWJ35_RS25415Not AvailableNegative1286379 - 128771348635.5
helix-turn-helix domain-containing proteinWJ35_RS25420Not AvailableNegative1287717 - 12879658813.57
sap1 transcriptional regulator saprWJ35_RS25425Not AvailablePositive1288221 - 128911433337.1
d-alanyl-d-alanine dipeptidaseWJ35_RS25430Not AvailablePositive1289131 - 128969420584.5
abc transporter substrate-binding proteinWJ35_RS25435Not AvailablePositive1289768 - 129136958102.4
abc transporter permeaseWJ35_RS25440Not AvailablePositive1291380 - 129245038352.5
nickel transporter permeaseWJ35_RS25445Not AvailablePositive1292526 - 129344031897.8
abc transporter atp-binding proteinWJ35_RS25450Not AvailablePositive1293442 - 129431431340.5
abc transporter atp-binding proteinWJ35_RS25455Not AvailablePositive1294311 - 129507227919.9

Displaying genes 4161 – 4170 of 4952 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.