Paraburkholderia caribensis strain Bcrs1W

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caribensis strain Bcrs1W is a rod-shaped bacterium that thrives in vertisol soil, a type of clay-rich soil known for its capacity to retain moisture and nutrients. This organism possesses true flagella, which likely contribute to its motility and ability to navigate its soil environment effectively. The strain is characterized by the presence of three replicons, which suggests a complex genomic structure that may facilitate its adaptability and survival in varying conditions within its habitat. The genomic data for Paraburkholderia caribensis strain Bcrs1W can be accessed through three specific accession numbers: NZ_CP013347.1, NZ_CP013348.1, and NZ_CP013349.1. These accession numbers pertain to the strain's genomic sequences, which are essential for understanding its genetic makeup and potential functional capabilities. Ecologically, the presence of Paraburkholderia caribensis strain Bcrs1W in vertisol soil indicates its potential role in nutrient cycling and soil health. Given the unique properties of vertisol, which can impact microbial communities, this strain may contribute to processes such as organic matter decomposition and nitrogen fixation, thus playing a significant role in maintaining soil fertility and supporting plant growth.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caribensis
Strainstrain Bcrs1W

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatvertisol soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caribensis strain Bcrs1W chromosome 2, complete

Gene Summary

Adenine Count

572724 bp

Thymine Count

574329 bp

Guanine Count

950500 bp

Cytosine Count

951856 bp

Genome Length

3049409 bp

Protein-coding Genes

2749 genes

Non-Coding Genes

11 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ilvd/edd family dehydrataseATN79_RS31120Not AvailablePositive311486 - 31321962072.9
aldehyde dehydrogenase (nadp(+))ATN79_RS31125Not AvailablePositive313231 - 31482055154.1
mfs transporterATN79_RS31130Not AvailablePositive314870 - 31621948133.7
dihydrodipicolinate synthase family proteinATN79_RS31135Not AvailablePositive316265 - 31719433957.7
is30 family transposaseATN79_RS31140Not AvailablePositive317946 - 31896237716.8
2-methylaconitate cis-trans isomerase prpfATN79_RS31145Not AvailableNegative319180 - 32036140818.0
fe/s-dependent 2-methylisocitrate dehydratase acndATN79_RS31150Not AvailableNegative320398 - 32299594603.0
2-methylcitrate synthaseATN79_RS31155Not AvailableNegative323238 - 32440742519.9
methylisocitrate lyaseATN79_RS31160Not AvailableNegative324428 - 32536933839.5
propionate catabolism operon regulatory protein prprATN79_RS31165Not AvailablePositive325516 - 32746570244.0

Displaying genes 6341 – 6350 of 8367 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.