Paraburkholderia caribensis strain Bcrs1W

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caribensis strain Bcrs1W is a rod-shaped bacterium that thrives in vertisol soil, a type of clay-rich soil known for its capacity to retain moisture and nutrients. This organism possesses true flagella, which likely contribute to its motility and ability to navigate its soil environment effectively. The strain is characterized by the presence of three replicons, which suggests a complex genomic structure that may facilitate its adaptability and survival in varying conditions within its habitat. The genomic data for Paraburkholderia caribensis strain Bcrs1W can be accessed through three specific accession numbers: NZ_CP013347.1, NZ_CP013348.1, and NZ_CP013349.1. These accession numbers pertain to the strain's genomic sequences, which are essential for understanding its genetic makeup and potential functional capabilities. Ecologically, the presence of Paraburkholderia caribensis strain Bcrs1W in vertisol soil indicates its potential role in nutrient cycling and soil health. Given the unique properties of vertisol, which can impact microbial communities, this strain may contribute to processes such as organic matter decomposition and nitrogen fixation, thus playing a significant role in maintaining soil fertility and supporting plant growth.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caribensis
Strainstrain Bcrs1W

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatvertisol soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caribensis strain Bcrs1W chromosome 2, complete

Gene Summary

Adenine Count

572724 bp

Thymine Count

574329 bp

Guanine Count

950500 bp

Cytosine Count

951856 bp

Genome Length

3049409 bp

Protein-coding Genes

2749 genes

Non-Coding Genes

11 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ggdef domain-containing proteinATN79_RS15165Not AvailablePositive3439969 - 344091934753.3
phytanoyl-coa dioxygenase family proteinATN79_RS15170Not AvailablePositive3441214 - 344240443532.5
gfo/idh/moca family proteinATN79_RS15175Not AvailablePositive3442435 - 344358641426.3
hypothetical proteinATN79_RS15180Not AvailableNegative3444169 - 34444359742.42
class i sam-dependent methyltransferaseATN79_RS15190Not AvailablePositive3445133 - 344594529414.0
glutamine--fructose-6-phosphate transaminase (isomerizing)ATN79_RS15195Not AvailableNegative3446086 - 344790365735.8
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuATN79_RS15200Not AvailableNegative3447964 - 344932548106.5
trna 2-thiocytidine(32) synthetase ttcaATN79_RS15205Not AvailableNegative3449456 - 345046037323.0
dihydroneopterin aldolaseATN79_RS15210Not AvailableNegative3450464 - 345085914984.1
sdr family oxidoreductaseATN79_RS15215Not AvailableNegative3450969 - 345179928790.6

Displaying genes 5831 – 5840 of 8367 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.