Paraburkholderia caribensis strain Bcrs1W

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caribensis strain Bcrs1W is a rod-shaped bacterium that thrives in vertisol soil, a type of clay-rich soil known for its capacity to retain moisture and nutrients. This organism possesses true flagella, which likely contribute to its motility and ability to navigate its soil environment effectively. The strain is characterized by the presence of three replicons, which suggests a complex genomic structure that may facilitate its adaptability and survival in varying conditions within its habitat. The genomic data for Paraburkholderia caribensis strain Bcrs1W can be accessed through three specific accession numbers: NZ_CP013347.1, NZ_CP013348.1, and NZ_CP013349.1. These accession numbers pertain to the strain's genomic sequences, which are essential for understanding its genetic makeup and potential functional capabilities. Ecologically, the presence of Paraburkholderia caribensis strain Bcrs1W in vertisol soil indicates its potential role in nutrient cycling and soil health. Given the unique properties of vertisol, which can impact microbial communities, this strain may contribute to processes such as organic matter decomposition and nitrogen fixation, thus playing a significant role in maintaining soil fertility and supporting plant growth.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caribensis
Strainstrain Bcrs1W

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatvertisol soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caribensis strain Bcrs1W chromosome 2, complete

Gene Summary

Adenine Count

572724 bp

Thymine Count

574329 bp

Guanine Count

950500 bp

Cytosine Count

951856 bp

Genome Length

3049409 bp

Protein-coding Genes

2749 genes

Non-Coding Genes

11 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylamine--glycine ligaseATN79_RS10925Not AvailablePositive2489757 - 249104045644.8
oxygen-dependent coproporphyrinogen oxidaseATN79_RS10930Not AvailablePositive2491320 - 249225235143.5
nicotinate-nucleotide adenylyltransferaseATN79_RS10935Not AvailablePositive2492304 - 249304426625.4
ribosome silencing factorATN79_RS10940Not AvailablePositive2493047 - 249350516910.8
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhATN79_RS10945Not AvailablePositive2493576 - 249404617619.4
nucleoside triphosphate pyrophosphataseATN79_RS10950Not AvailablePositive2494207 - 249483322162.5
ribonuclease gATN79_RS10955Not AvailablePositive2494843 - 249631255218.4
hypothetical proteinATN79_RS10960Not AvailablePositive2496388 - 24965767026.11
hypothetical proteinATN79_RS43390Not AvailablePositive2496740 - 24969106641.17
hypothetical proteinATN79_RS10965Not AvailablePositive2497048 - 249734410619.2

Displaying genes 4971 – 4980 of 8367 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.