Paraburkholderia caribensis strain Bcrs1W

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caribensis strain Bcrs1W is a rod-shaped bacterium that thrives in vertisol soil, a type of clay-rich soil known for its capacity to retain moisture and nutrients. This organism possesses true flagella, which likely contribute to its motility and ability to navigate its soil environment effectively. The strain is characterized by the presence of three replicons, which suggests a complex genomic structure that may facilitate its adaptability and survival in varying conditions within its habitat. The genomic data for Paraburkholderia caribensis strain Bcrs1W can be accessed through three specific accession numbers: NZ_CP013347.1, NZ_CP013348.1, and NZ_CP013349.1. These accession numbers pertain to the strain's genomic sequences, which are essential for understanding its genetic makeup and potential functional capabilities. Ecologically, the presence of Paraburkholderia caribensis strain Bcrs1W in vertisol soil indicates its potential role in nutrient cycling and soil health. Given the unique properties of vertisol, which can impact microbial communities, this strain may contribute to processes such as organic matter decomposition and nitrogen fixation, thus playing a significant role in maintaining soil fertility and supporting plant growth.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caribensis
Strainstrain Bcrs1W

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatvertisol soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caribensis strain Bcrs1W chromosome 2, complete

Gene Summary

Adenine Count

572724 bp

Thymine Count

574329 bp

Guanine Count

950500 bp

Cytosine Count

951856 bp

Genome Length

3049409 bp

Protein-coding Genes

2749 genes

Non-Coding Genes

11 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cupin domain-containing proteinATN79_RS41220Not AvailablePositive2317116 - 231748713030.4
fad-binding oxidoreductaseATN79_RS10135Not AvailableNegative2318293 - 231968451585.6
cytosine permeaseATN79_RS10140Not AvailableNegative2319746 - 232134457297.0
lysr family transcriptional regulatorATN79_RS10145Not AvailableNegative2321604 - 232255734519.3
nad(p)/fad-dependent oxidoreductaseATN79_RS10150Not AvailablePositive2322687 - 232403948925.8
lysr family transcriptional regulator argpATN79_RS10155Not AvailableNegative2324072 - 232496533031.6
lyse/argo family amino acid transporterATN79_RS10160Not AvailablePositive2325063 - 232568621930.3
endo alpha-1,4 polygalactosaminidaseATN79_RS10165Not AvailableNegative2325726 - 232666134451.0
exopolysaccharide pel transporter pelgATN79_RS10170Not AvailableNegative2326670 - 232804350588.7
gt4 family glycosyltransferase pelfATN79_RS10175Not AvailableNegative2328043 - 232968060210.8

Displaying genes 4811 – 4820 of 8367 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.