Paraburkholderia caribensis strain Bcrs1W

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caribensis strain Bcrs1W is a rod-shaped bacterium that thrives in vertisol soil, a type of clay-rich soil known for its capacity to retain moisture and nutrients. This organism possesses true flagella, which likely contribute to its motility and ability to navigate its soil environment effectively. The strain is characterized by the presence of three replicons, which suggests a complex genomic structure that may facilitate its adaptability and survival in varying conditions within its habitat. The genomic data for Paraburkholderia caribensis strain Bcrs1W can be accessed through three specific accession numbers: NZ_CP013347.1, NZ_CP013348.1, and NZ_CP013349.1. These accession numbers pertain to the strain's genomic sequences, which are essential for understanding its genetic makeup and potential functional capabilities. Ecologically, the presence of Paraburkholderia caribensis strain Bcrs1W in vertisol soil indicates its potential role in nutrient cycling and soil health. Given the unique properties of vertisol, which can impact microbial communities, this strain may contribute to processes such as organic matter decomposition and nitrogen fixation, thus playing a significant role in maintaining soil fertility and supporting plant growth.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caribensis
Strainstrain Bcrs1W

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatvertisol soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caribensis strain Bcrs1W chromosome 2, complete

Gene Summary

Adenine Count

572724 bp

Thymine Count

574329 bp

Guanine Count

950500 bp

Cytosine Count

951856 bp

Genome Length

3049409 bp

Protein-coding Genes

2749 genes

Non-Coding Genes

11 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinATN79_RS06210Not AvailablePositive1416395 - 141706024000.2
AttrNot AvailableNot AvailablePositive1416802 - 1416813Not Available
chromosomal replication initiator protein dnaaATN79_RS00005Not AvailablePositive315 - 188957597.6
dna polymerase iii subunit betaATN79_RS00010Not AvailablePositive2147 - 325040774.6
dna topoisomerase (atp-hydrolyzing) subunit bATN79_RS00015Not AvailablePositive3364 - 583591234.9
hypothetical proteinATN79_RS00020Not AvailableNegative5915 - 61428677.21
gyri-like domain-containing proteinATN79_RS00025Not AvailableNegative6200 - 706631842.0
ethanolamine permeaseATN79_RS00030Not AvailablePositive7352 - 875550524.3
ethanolamine ammonia-lyase subunit eutbATN79_RS00035Not AvailablePositive8824 - 1021850407.5
ethanolamine ammonia-lyase subunit eutcATN79_RS00040Not AvailablePositive10215 - 1100628361.9

Displaying genes 2781 – 2790 of 8367 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.