Sphingopyxis terrae subsp. terrae NBRC 15098 strain 203-1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis terrae subsp. terrae NBRC 15098 strain 203-1 is a rod-shaped bacterium notable for its distinct genetic characteristics. This strain possesses two replicons, which are essential components for its genetic stability and replication processes. The complete genomic information for this strain can be accessed through the following accession numbers: NZ_CP013342.1 and NZ_CP013343.1. The rod shape of Sphingopyxis terrae subsp. terrae is typical of many bacteria and can influence its motility and environmental interactions. This morphology may facilitate its ability to colonize various substrates, contributing to its ecological niche. In terms of its ecological role, Sphingopyxis species are often associated with soil environments, where they may play a part in the degradation of organic compounds. The presence of multiple replicons in strain 203-1 suggests a genetic adaptability that could enhance its survival and metabolic versatility in diverse soil habitats. This adaptability is significant, as it may allow Sphingopyxis terrae subsp. terrae to thrive in environments with varying nutrient availability and to participate effectively in biogeochemical cycles. In summary, Sphingopyxis terrae subsp. terrae NBRC 15098 strain 203-1 is characterized by its rod shape and possession of two replicons, traits that may contribute to its ecological functions in soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis terrae
Strainsubsp. terrae NBRC 15098 strain 203-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis terrae subsp. terrae NBRC 15098 strain 203-1

Gene Summary

Adenine Count

705454 bp

Thymine Count

704229 bp

Guanine Count

1282657 bp

Cytosine Count

1286745 bp

Genome Length

3979087 bp

Protein-coding Genes

3813 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ectonucleotide pyrophosphatase/phosphodiesteraseAOA14_RS13715Not AvailableNegative2880748 - 288197144640.4
m20/m25/m40 family metallo-hydrolaseAOA14_RS13720Not AvailablePositive2882135 - 288372757481.1
alkaline phosphataseAOA14_RS13725Not AvailableNegative2883748 - 288531658112.9
copper resistance protein bAOA14_RS13730Not AvailableNegative2885396 - 288642135828.3
copper resistance system multicopper oxidaseAOA14_RS13735Not AvailableNegative2886427 - 288813061444.9
glutaredoxin family proteinAOA14_RS13740Not AvailableNegative2888127 - 288886727328.7
merr family dna-binding proteinAOA14_RS13745Not AvailablePositive2888909 - 288931014454.3
redox-regulated atpase ychfAOA14_RS13750Not AvailableNegative2889429 - 289052639086.5
gnat family acetyltransferaseAOA14_RS13755Not AvailableNegative2890539 - 289094914929.7
aminoacyl-trna hydrolaseAOA14_RS13760Not AvailableNegative2890946 - 289151520894.2

Displaying genes 2791 – 2800 of 3869 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.